Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 AC016405.3-201ENST00000607710 860 ntBASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 AC010536.3-201ENST00000620306 533 ntBASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 AC007322.4-201ENST00000509611 723 ntBASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRBV5-5A0A0J9YX44 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-5A0A0J9YX44 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV5-5A0A0J9YX44 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.21■□□□□ 0.34
TRBV5-5A0A0J9YX44 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.34
TRBV5-5A0A0J9YX44 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV5-5A0A0J9YX44 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV5-5A0A0J9YX44 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC100791.3-201ENST00000617619 330 ntBASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRBV5-5A0A0J9YX44 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 AL138781.2-201ENST00000617896 1843 ntBASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms