Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 AL121829.2-201ENST00000620908 328 ntBASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IGHV4-28A0A0C4DH34 KRT16P6-202ENST00000425692 1426 ntBASIC14.33□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.33□□□□□ -0.11
IGHV4-28A0A0C4DH34 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
IGHV4-28A0A0C4DH34 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.33□□□□□ -0.11
IGHV4-28A0A0C4DH34 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC124016.1-201ENST00000609552 612 ntBASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV4-28A0A0C4DH34 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC020907.5-201ENST00000624372 1936 ntBASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV4-28A0A0C4DH34 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms