Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-4A0A0B4J246 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 SLC7A5P2-201ENST00000553010 536 ntBASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-4A0A0B4J246 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 PCDHAC2-203ENST00000615316 3011 ntBASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 AC097381.1-201ENST00000429019 1296 ntBASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 KRT18P11-201ENST00000435214 1283 ntBASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 CDV3P1-201ENST00000471403 739 ntBASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-4A0A0B4J246 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms