Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 KRT8P20-201ENST00000423953 1409 ntBASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 KRT16P6-202ENST00000425692 1426 ntBASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 AP000974.1-201ENST00000623909 2387 ntBASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 CYP2T3P-201ENST00000601990 817 ntBASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV3A0A0B4J244 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
TRAV3A0A0B4J244 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV3A0A0B4J244 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 RARRES2P6-201ENST00000567333 442 ntBASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV3A0A0B4J244 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 AL020996.1-203ENST00000536896 2307 ntBASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 AC069236.1-201ENST00000604339 616 ntBASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 BID-214ENST00000617586 542 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV3A0A0B4J244 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms