Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.56■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PHGDH-210ENST00000641115 1638 ntBASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 MIR4758-201ENST00000577688 71 ntBASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.55■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC083880.1-201ENST00000608266 535 ntBASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC116562.4-201ENST00000641316 2276 ntBASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC005829.2-201ENST00000571422 1056 ntBASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC006557.6-201ENST00000623071 864 ntBASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC007952.6-201ENST00000573168 2673 ntBASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC003957.1-201ENST00000625108 2673 ntBASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC097658.1-201ENST00000475555 843 ntBASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
IGKV1D-43A0A0B4J1Z2 AP001271.2-201ENST00000624018 1556 ntBASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms