Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL133243.2-201ENST00000610331 1621 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL645733.1-201ENST00000402250 217 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 BX284632.2-201ENST00000421091 399 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 VN1R54P-201ENST00000435210 1049 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 SOCS5P1-201ENST00000440415 949 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL663074.2-201ENST00000440621 479 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL512605.1-202ENST00000441919 381 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL512593.1-201ENST00000444758 779 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL359955.2-201ENST00000445380 353 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 OR4D12P-201ENST00000509361 911 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 RNA5SP438-201ENST00000516561 112 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC090236.2-201ENST00000587933 1101 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AL359263.1-201ENST00000441188 2796 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 RN7SKP47-201ENST00000365347 328 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC023141.3-201ENST00000436698 278 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 CEACAMP9-201ENST00000442990 513 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC239367.2-201ENST00000447309 705 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 RPL34P33-201ENST00000486062 334 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 FO393422.1-201ENST00000603908 708 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AL589674.2-201ENST00000604304 337 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 RPSAP73-201ENST00000614820 330 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC092725.2-201ENST00000567658 1389 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC096992.2-201ENST00000609553 1684 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 BMS1P17-202ENST00000416720 316 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 RN7SL187P-201ENST00000495587 303 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 RN7SKP66-201ENST00000516681 231 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AL139407.1-201ENST00000613826 1175 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.07□□□□□ -1.44
CHD8Q9HCK8 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.07□□□□□ -1.44
CHD8Q9HCK8 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL512662.1-201ENST00000624850 2251 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC007993.1-201ENST00000621298 2430 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL662795.2-201ENST00000624252 3706 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 SNORA21-201ENST00000362423 132 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 RPL34P3-201ENST00000421454 338 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL512637.1-201ENST00000439523 1231 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 RN7SL369P-201ENST00000477138 299 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms