Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC011891.2-201ENST00000604949 397 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 5S_rRNA.23-201ENST00000612086 102 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC004241.2-201ENST00000614562 444 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 CASC19-208ENST00000641056 1292 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 CASC19-227ENST00000641411 1285 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 TINAG-203ENST00000370869 782 ntTSL 3 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 TRIM60P13-201ENST00000432350 1283 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 SNORA81.1-201ENST00000458922 177 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 RPL34P34-201ENST00000465389 354 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 AP000805.1-201ENST00000471604 784 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 RPS27P20-201ENST00000492051 246 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 SCARNA6-201ENST00000515982 265 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 ST13P6-201ENST00000522430 1102 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 OR4A42P-201ENST00000531397 938 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 DPPA3P2-202ENST00000557188 1219 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 AC079315.1-201ENST00000602952 623 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 AL354696.1-201ENST00000614652 497 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 CASC19-232ENST00000641480 1244 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 CASC19-274ENST00000642018 970 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 AP000766.1-201ENST00000561746 4140 ntBASIC9.38□□□□□ -0.91
USP35Q9P2H5 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
USP35Q9P2H5 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USP35Q9P2H5 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 AC019178.1-201ENST00000392337 440 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 RN7SKP240-201ENST00000410583 375 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 RN7SKP254-201ENST00000410685 310 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 AL773545.3-201ENST00000414297 706 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 HMGN1P2-201ENST00000445197 310 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 RPS26P11-201ENST00000463445 348 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 RPS26P6-201ENST00000475156 348 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 AC112484.3-201ENST00000505910 329 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 RN7SKP196-201ENST00000516267 345 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 RPL29P33-201ENST00000587474 316 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 CFTRP2-201ENST00000634304 199 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 AC008691.1-209ENST00000642094 814 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 TMC3-AS1-206ENST00000612811 2726 ntBASIC9.37□□□□□ -0.91
USP35Q9P2H5 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
USP35Q9P2H5 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC9.37□□□□□ -0.91
USP35Q9P2H5 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms