Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 AC096708.4-201ENST00000620563 552 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 AC004014.2-201ENST00000623718 5122 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 COG2-209ENST00000534989 2963 ntTSL 2 BASIC11.35□□□□□ -0.59
SMARCA4P51532 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 FGG-205ENST00000407946 1636 ntTSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 RNU1-46P-201ENST00000384425 164 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 AL023284.3-201ENST00000407767 334 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 RPS7P8-201ENST00000418311 581 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 MYO5BP2-201ENST00000449815 1277 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC11.35□□□□□ -0.59
SMARCA4P51532 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC11.35□□□□□ -0.59
SMARCA4P51532 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 AL121579.2-201ENST00000555466 590 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 COX6CP7-201ENST00000597056 208 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC11.35□□□□□ -0.59
SMARCA4P51532 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 MAPK10-261ENST00000641050 3109 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC11.34□□□□□ -0.59
SMARCA4P51532 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC11.34□□□□□ -0.59
SMARCA4P51532 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMARCA4P51532 SACS-202ENST00000402364 15134 ntTSL 2 BASIC11.34□□□□□ -0.59
SMARCA4P51532 AC110373.1-201ENST00000505994 3505 ntBASIC11.34□□□□□ -0.59
SMARCA4P51532 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SMARCA4P51532 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC11.34□□□□□ -0.59
SMARCA4P51532 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMARCA4P51532 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC11.34□□□□□ -0.59
SMARCA4P51532 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
SMARCA4P51532 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMARCA4P51532 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC11.34□□□□□ -0.59
SMARCA4P51532 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMARCA4P51532 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMARCA4P51532 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC11.34□□□□□ -0.59
SMARCA4P51532 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
SMARCA4P51532 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMARCA4P51532 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SMARCA4P51532 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC11.34□□□□□ -0.59
SMARCA4P51532 BX323845.3-201ENST00000428215 527 ntBASIC11.34□□□□□ -0.59
SMARCA4P51532 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC11.34□□□□□ -0.59
SMARCA4P51532 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC11.34□□□□□ -0.59
SMARCA4P51532 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC11.34□□□□□ -0.59
SMARCA4P51532 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC11.34□□□□□ -0.59
SMARCA4P51532 SBDSP1-204ENST00000453858 737 ntBASIC11.34□□□□□ -0.59
SMARCA4P51532 COPS8P2-201ENST00000473228 627 ntBASIC11.34□□□□□ -0.59
SMARCA4P51532 AC022206.1-201ENST00000495947 347 ntBASIC11.34□□□□□ -0.59
SMARCA4P51532 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMARCA4P51532 AC092681.3-201ENST00000609463 678 ntBASIC11.34□□□□□ -0.59
SMARCA4P51532 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC11.34□□□□□ -0.59
SMARCA4P51532 AC009237.3-203ENST00000442128 3551 ntBASIC11.34□□□□□ -0.59
SMARCA4P51532 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMARCA4P51532 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
SMARCA4P51532 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
SMARCA4P51532 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC11.33□□□□□ -0.59
SMARCA4P51532 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC11.33□□□□□ -0.6
SMARCA4P51532 AC022325.1-201ENST00000502748 2199 ntBASIC11.33□□□□□ -0.6
SMARCA4P51532 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SMARCA4P51532 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SMARCA4P51532 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMARCA4P51532 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC11.33□□□□□ -0.6
SMARCA4P51532 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC11.33□□□□□ -0.6
SMARCA4P51532 AC008410.1-201ENST00000483777 339 ntBASIC11.33□□□□□ -0.6
SMARCA4P51532 SSX6-203ENST00000509958 336 ntTSL 3 BASIC11.33□□□□□ -0.6
SMARCA4P51532 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC11.33□□□□□ -0.6
SMARCA4P51532 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC11.33□□□□□ -0.6
SMARCA4P51532 AL008723.3-201ENST00000608926 449 ntBASIC11.33□□□□□ -0.6
SMARCA4P51532 RN7SL787P-201ENST00000613000 284 ntBASIC11.33□□□□□ -0.6
SMARCA4P51532 AC116667.2-201ENST00000641075 823 ntBASIC11.33□□□□□ -0.6
SMARCA4P51532 AC024651.2-201ENST00000562480 2098 ntBASIC11.33□□□□□ -0.6
SMARCA4P51532 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMARCA4P51532 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC11.33□□□□□ -0.6
SMARCA4P51532 AL353807.3-201ENST00000500626 2505 ntBASIC11.33□□□□□ -0.6
SMARCA4P51532 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMARCA4P51532 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMARCA4P51532 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMARCA4P51532 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC11.33□□□□□ -0.6
SMARCA4P51532 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SMARCA4P51532 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC11.32□□□□□ -0.6
SMARCA4P51532 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMARCA4P51532 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms