Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 SAMMSON-222ENST00000641901 2727 ntBASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 AC129502.1-201ENST00000623261 1654 ntBASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 BX322650.1-201ENST00000332359 2143 ntBASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 AC090771.1-201ENST00000585803 1618 ntBASIC6.58□□□□□ -1.36
CCDC187A0A096LP49 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AP002800.1-201ENST00000624982 2225 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AL049634.1-201ENST00000453770 1720 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 RNA5SP172-201ENST00000365061 118 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 RPS10P21-201ENST00000430654 475 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 MAPRE1P3-201ENST00000435438 796 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AP000949.1-201ENST00000438328 629 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 SNRPBP1-201ENST00000443634 282 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC096922.1-201ENST00000461635 651 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 OR7E22P-201ENST00000478335 1035 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 RPS27P20-201ENST00000492051 246 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 PFN1P8-201ENST00000497012 543 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC019227.1-201ENST00000526902 510 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC009729.1-201ENST00000548873 1133 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC005519.1-201ENST00000554490 601 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC025283.1-201ENST00000572039 734 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 MIR3135A-201ENST00000578460 77 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC012368.3-201ENST00000604190 219 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 AC009452.1-201ENST00000640823 606 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 CASC19-232ENST00000641480 1244 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 CASC19-274ENST00000642018 970 ntBASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC187A0A096LP49 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 LINC01616-201ENST00000561816 2280 ntBASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 AP003486.1-201ENST00000525716 3994 ntBASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 PRNCR1-201ENST00000635449 12727 ntBASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 NF1P8-201ENST00000415351 1461 ntBASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 UBBP1-201ENST00000392399 473 ntBASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 MIR1275-201ENST00000408770 80 ntBASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 MIR1282-201ENST00000408865 101 ntBASIC6.56□□□□□ -1.36
CCDC187A0A096LP49 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 259.5 ms