Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC8□□□□□ -1.13
UPF2Q9HAU5 AL162632.2-201ENST00000553933 399 ntBASIC8□□□□□ -1.13
UPF2Q9HAU5 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC8□□□□□ -1.13
UPF2Q9HAU5 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC8□□□□□ -1.13
UPF2Q9HAU5 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8□□□□□ -1.13
UPF2Q9HAU5 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8□□□□□ -1.13
UPF2Q9HAU5 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC8□□□□□ -1.13
UPF2Q9HAU5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
UPF2Q9HAU5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
UPF2Q9HAU5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8□□□□□ -1.13
UPF2Q9HAU5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
UPF2Q9HAU5 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
UPF2Q9HAU5 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8□□□□□ -1.13
UPF2Q9HAU5 BTK-209ENST00000618050 2417 ntTSL 5 BASIC8□□□□□ -1.13
UPF2Q9HAU5 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8□□□□□ -1.13
UPF2Q9HAU5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
UPF2Q9HAU5 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC8□□□□□ -1.13
UPF2Q9HAU5 AC067942.1-201ENST00000488045 1493 ntBASIC8□□□□□ -1.13
UPF2Q9HAU5 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8□□□□□ -1.13
UPF2Q9HAU5 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8□□□□□ -1.13
UPF2Q9HAU5 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 IMMTP1-201ENST00000435590 2219 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AP000547.3-204ENST00000588548 2523 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 SNORA30B-201ENST00000365319 129 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 NIP7P1-201ENST00000433227 512 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 SNX18P9-201ENST00000440580 835 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 RN7SL849P-201ENST00000485236 295 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AL135933.1-201ENST00000498657 802 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AC091849.1-201ENST00000509920 121 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AC007159.1-201ENST00000566529 4706 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 AC073857.1-201ENST00000625082 1054 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 NEK2P2-201ENST00000438441 1338 ntBASIC7.99□□□□□ -1.13
UPF2Q9HAU5 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UPF2Q9HAU5 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AKAP17BP-201ENST00000431706 2719 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AL357632.1-201ENST00000426688 643 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AC009237.1-201ENST00000442127 744 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 PFN1P11-201ENST00000445829 389 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 RN7SL149P-201ENST00000465197 281 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 Z99943.2-201ENST00000507585 266 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AC021820.1-201ENST00000525564 808 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AP001264.1-201ENST00000620602 703 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 AC018692.2-201ENST00000624130 348 ntBASIC7.98□□□□□ -1.13
UPF2Q9HAU5 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
UPF2Q9HAU5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 FUNDC2P3-201ENST00000334716 533 ntBASIC7.97□□□□□ -1.13
UPF2Q9HAU5 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 RPS10P21-201ENST00000430654 475 ntBASIC7.97□□□□□ -1.13
UPF2Q9HAU5 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 AC003989.1-201ENST00000434569 565 ntBASIC7.97□□□□□ -1.13
UPF2Q9HAU5 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 RN7SL492P-201ENST00000460700 295 ntBASIC7.97□□□□□ -1.13
UPF2Q9HAU5 RN7SL145P-201ENST00000469955 296 ntBASIC7.97□□□□□ -1.13
UPF2Q9HAU5 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
UPF2Q9HAU5 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms