Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHKBP1Q8TBC3 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 CR383656.5-201ENST00000547616 1340 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AL136298.2-201ENST00000556497 1570 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 RNU4-75P-201ENST00000364621 146 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 MIR498-201ENST00000385134 124 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AL356131.1-201ENST00000405826 414 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC017019.1-201ENST00000426129 261 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 MTND2P21-201ENST00000436242 1042 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 SLAMF6P1-201ENST00000451067 602 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 OFD1P7Y-201ENST00000454643 1155 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 SCDP1-201ENST00000455244 1081 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 ATG12P2-201ENST00000456830 416 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC093325.1-201ENST00000508378 326 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 UBTFL9-201ENST00000534504 1148 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC024085.1-201ENST00000604299 432 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC105129.3-201ENST00000605455 485 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC113361.1-201ENST00000606683 543 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC092794.1-201ENST00000612734 582 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC010998.3-201ENST00000613871 631 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 AC009283.1-201ENST00000615852 645 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 OR7E91P-202ENST00000642062 1198 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 MAPK10-281ENST00000641170 3070 ntBASIC7.8□□□□□ -1.16
SHKBP1Q8TBC3 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 PSMC1P4-201ENST00000515236 1327 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 DDX10P2-201ENST00000417796 2614 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 AC023886.2-201ENST00000321285 411 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 RNU6-517P-201ENST00000384362 110 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 AL355375.1-201ENST00000405686 392 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 SETP22-201ENST00000412243 957 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 AL390840.1-201ENST00000420303 988 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 AC241520.1-201ENST00000422654 1099 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 PTP4A1P7-201ENST00000423476 514 ntBASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.79□□□□□ -1.16
SHKBP1Q8TBC3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms