RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
LINC00641-202ENST00000555688 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
LINC00641-202ENST00000555688 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
LINC00641-202ENST00000555688 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
LINC00641-202ENST00000555688 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
LINC00641-202ENST00000555688 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
LINC00641-202ENST00000555688 FOXD1Q16676 465 aa18.12■□□□□ 0.49
LINC00641-202ENST00000555688 ADRA2BP18089 450 aa17.74■□□□□ 0.43
LINC00641-202ENST00000555688 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
LINC00641-202ENST00000555688 NISCHQ9Y2I1 1504 aa17.29■□□□□ 0.36
LINC00641-202ENST00000555688 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
LINC00641-202ENST00000555688 KCNA4P22459 653 aa16.69■□□□□ 0.26
LINC00641-202ENST00000555688 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
LINC00641-202ENST00000555688 MSH5O43196 834 aa16.58■□□□□ 0.24
LINC00641-202ENST00000555688 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
LINC00641-202ENST00000555688 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
LINC00641-202ENST00000555688 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
LINC00641-202ENST00000555688 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.17
LINC00641-202ENST00000555688 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
LINC00641-202ENST00000555688 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
LINC00641-202ENST00000555688 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
LINC00641-202ENST00000555688 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
LINC00641-202ENST00000555688 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
LINC00641-202ENST00000555688 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.1
LINC00641-202ENST00000555688 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
LINC00641-202ENST00000555688 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
LINC00641-202ENST00000555688 ZBTB22O15209 634 aa15.36■□□□□ 0.05
LINC00641-202ENST00000555688 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
LINC00641-202ENST00000555688 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
LINC00641-202ENST00000555688 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
LINC00641-202ENST00000555688 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
LINC00641-202ENST00000555688 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
LINC00641-202ENST00000555688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
LINC00641-202ENST00000555688 ATXN8OSP0DMR3 200 aa14.74□□□□□ -0.05
LINC00641-202ENST00000555688 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
LINC00641-202ENST00000555688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
LINC00641-202ENST00000555688 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
LINC00641-202ENST00000555688 ZCCHC6Q5VYS8 1495 aaKnown RBP14.55□□□□□ -0.08
LINC00641-202ENST00000555688 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.08
LINC00641-202ENST00000555688 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
LINC00641-202ENST00000555688 APLP2Q06481 763 aa14.33□□□□□ -0.12
LINC00641-202ENST00000555688 DCAF1Q9Y4B6 1507 aa14.28□□□□□ -0.12
LINC00641-202ENST00000555688 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
LINC00641-202ENST00000555688 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
LINC00641-202ENST00000555688 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
LINC00641-202ENST00000555688 CACNB1Q02641 598 aaPredicted RBP14.17□□□□□ -0.14
LINC00641-202ENST00000555688 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
LINC00641-202ENST00000555688 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
LINC00641-202ENST00000555688 FKBP8Q14318 412 aa14.06□□□□□ -0.16
LINC00641-202ENST00000555688 ABCC9O60706 1549 aa14.05□□□□□ -0.16
LINC00641-202ENST00000555688 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
LINC00641-202ENST00000555688 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
LINC00641-202ENST00000555688 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
LINC00641-202ENST00000555688 CAPN15O75808 1086 aa13.98□□□□□ -0.17
LINC00641-202ENST00000555688 NACADO15069 1562 aa13.91□□□□□ -0.18
LINC00641-202ENST00000555688 POTEHQ6S545 545 aa13.89□□□□□ -0.19
LINC00641-202ENST00000555688 POLA2Q14181 598 aa13.88□□□□□ -0.19
LINC00641-202ENST00000555688 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
LINC00641-202ENST00000555688 FBLN2P98095 1184 aa13.8□□□□□ -0.2
LINC00641-202ENST00000555688 SCRIBQ14160 1630 aa13.8□□□□□ -0.2
LINC00641-202ENST00000555688 SUPT5HO00267 1087 aaKnown RBP13.76□□□□□ -0.21
LINC00641-202ENST00000555688 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
LINC00641-202ENST00000555688 ABCB7O75027 752 aa13.73□□□□□ -0.21
LINC00641-202ENST00000555688 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
LINC00641-202ENST00000555688 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
LINC00641-202ENST00000555688 DSG3P32926 999 aa13.68□□□□□ -0.22
LINC00641-202ENST00000555688 PROM2Q8N271 834 aa13.57□□□□□ -0.24
LINC00641-202ENST00000555688 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
LINC00641-202ENST00000555688 UNC13AQ9UPW8 1703 aa13.52□□□□□ -0.25
LINC00641-202ENST00000555688 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
LINC00641-202ENST00000555688 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
LINC00641-202ENST00000555688 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.25
LINC00641-202ENST00000555688 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
LINC00641-202ENST00000555688 BICRAQ9NZM4 1560 aa13.39□□□□□ -0.27
LINC00641-202ENST00000555688 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
LINC00641-202ENST00000555688 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
LINC00641-202ENST00000555688 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
LINC00641-202ENST00000555688 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
LINC00641-202ENST00000555688 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
LINC00641-202ENST00000555688 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
LINC00641-202ENST00000555688 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC00641-202ENST00000555688 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
LINC00641-202ENST00000555688 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
LINC00641-202ENST00000555688 VASPP50552 380 aaPredicted RBP13.28□□□□□ -0.28
LINC00641-202ENST00000555688 WIZO95785 1651 aa13.27□□□□□ -0.29
LINC00641-202ENST00000555688 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
LINC00641-202ENST00000555688 STAG3Q9UJ98 1225 aa13.15□□□□□ -0.31
LINC00641-202ENST00000555688 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
LINC00641-202ENST00000555688 TOP2AP11388 1531 aaKnown RBP13.1□□□□□ -0.31
LINC00641-202ENST00000555688 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.31
LINC00641-202ENST00000555688 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
LINC00641-202ENST00000555688 CCDC88BA6NC98 1476 aa13.01□□□□□ -0.33
LINC00641-202ENST00000555688 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
LINC00641-202ENST00000555688 SMARCA2P51531 1590 aa13.01□□□□□ -0.33
LINC00641-202ENST00000555688 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
LINC00641-202ENST00000555688 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
LINC00641-202ENST00000555688 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.34
LINC00641-202ENST00000555688 MIER1Q8N108 512 aa12.94□□□□□ -0.34
LINC00641-202ENST00000555688 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
LINC00641-202ENST00000555688 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms