Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC092821.2-201ENST00000545710 2042 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC078880.4-201ENST00000617627 1749 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 OR52B5P-204ENST00000641744 3467 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC129502.1-201ENST00000623261 1654 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 ABCA11P-202ENST00000504019 2110 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 XKRY2-202ENST00000623874 1581 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 XKRY-202ENST00000624960 1581 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AP002833.3-201ENST00000625075 2265 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC010894.1-201ENST00000313760 361 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 RAB5CP1-201ENST00000395972 580 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC091390.2-201ENST00000432573 374 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 CDK7P1-201ENST00000434574 693 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 RN7SL168P-201ENST00000463821 279 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 RPS7P10-201ENST00000464254 603 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC096743.1-201ENST00000485172 319 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 SUMO2P7-201ENST00000511179 285 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AP001000.1-201ENST00000526843 742 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 SETP17-201ENST00000534163 817 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 PPIAP14-201ENST00000577627 496 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 MIR3157-201ENST00000578688 85 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC011500.1-201ENST00000601963 469 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC007255.2-201ENST00000604053 631 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC013731.1-201ENST00000604340 883 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC007938.1-201ENST00000562524 2902 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 AC090181.3-201ENST00000624777 1514 ntBASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NPIPA1Q9UND3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 AC217777.1-201ENST00000570034 1471 ntBASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 AC127070.3-201ENST00000503695 3263 ntBASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 SNORA64.3-201ENST00000365647 134 ntBASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 MIR621-201ENST00000384919 96 ntBASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NPIPA1Q9UND3 FDPSP5-201ENST00000399474 1057 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms