Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC020765.1-201ENST00000604296 328 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AC015819.1-201ENST00000613588 663 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AL031651.1-201ENST00000615357 1438 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 SNX18P10-201ENST00000625014 519 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 UG0898H09-202ENST00000623646 7040 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 SNORD35A-201ENST00000363389 86 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 SNORD94-201ENST00000386037 137 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AL139415.1-201ENST00000424862 352 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AC026254.2-201ENST00000475295 371 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 RN7SL502P-201ENST00000481857 290 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 SNORA58-201ENST00000505219 137 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 MRPS5P3-201ENST00000515577 166 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AC116917.1-201ENST00000520558 305 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AL133399.1-201ENST00000527476 298 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 RPL41P2-201ENST00000544920 409 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AL121579.2-201ENST00000555466 590 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 MIR3157-201ENST00000578688 85 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 MRPL57P1-201ENST00000621486 265 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 AL589993.1-201ENST00000407450 2524 ntBASIC9.51□□□□□ -0.89
SIN3AQ96ST3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SIN3AQ96ST3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 AC009948.3-201ENST00000603415 1798 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 RAD17P2-201ENST00000451754 1977 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 RBPJP6-201ENST00000411556 1431 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 MRPS6P2-201ENST00000381143 370 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 RNU1-46P-201ENST00000384425 164 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 AC083862.1-201ENST00000427378 1242 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 RPEP4-201ENST00000437636 602 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 SNRPCP11-201ENST00000492453 205 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 AL162632.2-201ENST00000553933 399 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 AC005479.3-201ENST00000602790 431 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 AC016251.2-201ENST00000623393 3089 ntBASIC9.5□□□□□ -0.89
SIN3AQ96ST3 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SIN3AQ96ST3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 AC005702.3-201ENST00000585345 1447 ntBASIC9.49□□□□□ -0.89
SIN3AQ96ST3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC9.49□□□□□ -0.89
SIN3AQ96ST3 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 RNU1-84P-201ENST00000365447 164 ntBASIC9.49□□□□□ -0.89
SIN3AQ96ST3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SIN3AQ96ST3 OR6R1P-201ENST00000431838 940 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms