RNA–Protein interactions for RNA: ENST00000394487.4

TLR4-202, Transcript of toll like receptor 4, humanhuman

TSL 1 (best) BASIC

Gene TLR4, Length 3,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4-202ENST00000394487 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.55
TLR4-202ENST00000394487 NISCHQ9Y2I1 1504 aa11.6□□□□□ -0.55
TLR4-202ENST00000394487 PCGF6Q9BYE7 350 aa11.48□□□□□ -0.57
TLR4-202ENST00000394487 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
TLR4-202ENST00000394487 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
TLR4-202ENST00000394487 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
TLR4-202ENST00000394487 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
TLR4-202ENST00000394487 HRCP23327 699 aa11.21□□□□□ -0.62
TLR4-202ENST00000394487 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
TLR4-202ENST00000394487 FAM9AQ8IZU1 332 aaPredicted RBP10.97□□□□□ -0.65
TLR4-202ENST00000394487 TTBK1Q5TCY1 1321 aaPredicted RBP10.96□□□□□ -0.66
TLR4-202ENST00000394487 YTHDC1Q96MU7 727 aaKnown RBP10.88□□□□□ -0.67
TLR4-202ENST00000394487 LOC105371045A0A1W2PR82 267 aa10.86□□□□□ -0.67
TLR4-202ENST00000394487 CENPBP07199 599 aaPredicted RBP10.85□□□□□ -0.67
TLR4-202ENST00000394487 MYT1Q01538 1121 aa10.79□□□□□ -0.68
TLR4-202ENST00000394487 CCER1Q8TC90 406 aaPredicted RBP10.79□□□□□ -0.68
TLR4-202ENST00000394487 ZEB1P37275 1124 aaPredicted RBP10.78□□□□□ -0.68
TLR4-202ENST00000394487 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
TLR4-202ENST00000394487 CHIC1Q5VXU3 224 aa10.74□□□□□ -0.69
TLR4-202ENST00000394487 GTF3C3Q9Y5Q9 886 aa10.66□□□□□ -0.7
TLR4-202ENST00000394487 SCAF1Q9H7N4 1312 aaKnown RBP10.64□□□□□ -0.71
TLR4-202ENST00000394487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.58□□□□□ -0.72
TLR4-202ENST00000394487 TRIM41Q8WV44 630 aa10.57□□□□□ -0.72
TLR4-202ENST00000394487 DIEXFQ68CQ4 756 aaKnown RBP10.52□□□□□ -0.72
TLR4-202ENST00000394487 ACIN1Q9UKV3 1341 aaKnown RBP10.51□□□□□ -0.73
TLR4-202ENST00000394487 NEUROD1Q13562 356 aa10.48□□□□□ -0.73
TLR4-202ENST00000394487 RANGAP1P46060 587 aaPredicted RBP10.47□□□□□ -0.73
TLR4-202ENST00000394487 ERICH6Q7L0X2 663 aa10.46□□□□□ -0.73
TLR4-202ENST00000394487 CCDC180Q9P1Z9 1646 aa10.42□□□□□ -0.74
TLR4-202ENST00000394487 APLP2Q06481 763 aa10.37□□□□□ -0.75
TLR4-202ENST00000394487 BCANQ96GW7 911 aa10.35□□□□□ -0.75
TLR4-202ENST00000394487 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
TLR4-202ENST00000394487 MYO15BQ96JP2 1530 aa10.31□□□□□ -0.76
TLR4-202ENST00000394487 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
TLR4-202ENST00000394487 NEFLP07196 543 aa10.29□□□□□ -0.76
TLR4-202ENST00000394487 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
TLR4-202ENST00000394487 ITGAEP38570 1179 aa10.16□□□□□ -0.78
TLR4-202ENST00000394487 DCAF1Q9Y4B6 1507 aa10.11□□□□□ -0.79
TLR4-202ENST00000394487 MIER1Q8N108 512 aa10.1□□□□□ -0.79
TLR4-202ENST00000394487 CNGB1Q14028 1251 aaPredicted RBP10.08□□□□□ -0.8
TLR4-202ENST00000394487 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
TLR4-202ENST00000394487 BCL11AQ9H165 835 aa10.04□□□□□ -0.8
TLR4-202ENST00000394487 FKBP8Q14318 412 aa10.01□□□□□ -0.81
TLR4-202ENST00000394487 ANP32EQ9BTT0 268 aa9.98□□□□□ -0.81
TLR4-202ENST00000394487 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
TLR4-202ENST00000394487 POLR3GLQ9BT43 218 aa9.9□□□□□ -0.82
TLR4-202ENST00000394487 NBR1Q14596 966 aa9.89□□□□□ -0.83
TLR4-202ENST00000394487 CSRNP3Q8WYN3 585 aa9.89□□□□□ -0.83
TLR4-202ENST00000394487 TRIM52Q96A61 297 aa9.89□□□□□ -0.83
TLR4-202ENST00000394487 CDK11AQ9UQ88 783 aaPredicted RBP9.89□□□□□ -0.83
TLR4-202ENST00000394487 IRX6P78412 446 aaPredicted RBP9.87□□□□□ -0.83
TLR4-202ENST00000394487 SUPT16HQ9Y5B9 1047 aaKnown RBP9.87□□□□□ -0.83
TLR4-202ENST00000394487 EIF5BO60841 1220 aaKnown RBP9.86□□□□□ -0.83
TLR4-202ENST00000394487 DDX10Q13206 875 aaKnown RBP9.83□□□□□ -0.84
TLR4-202ENST00000394487 HIRIP3Q9BW71 556 aaPredicted RBP9.81□□□□□ -0.84
TLR4-202ENST00000394487 ZCCHC6Q5VYS8 1495 aaKnown RBP9.8□□□□□ -0.84
TLR4-202ENST00000394487 DAXXQ9UER7 740 aaPredicted RBP9.8□□□□□ -0.84
TLR4-202ENST00000394487 ANP32CO43423 234 aa9.79□□□□□ -0.84
TLR4-202ENST00000394487 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
TLR4-202ENST00000394487 NPM2Q86SE8 214 aaKnown RBP9.78□□□□□ -0.84
TLR4-202ENST00000394487 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
TLR4-202ENST00000394487 FAM50AQ14320 339 aaKnown RBP9.74□□□□□ -0.85
TLR4-202ENST00000394487 HNRNPUQ00839 825 aaKnown RBP eCLIP9.73□□□□□ -0.85
TLR4-202ENST00000394487 CLSPNQ9HAW4 1339 aa9.73□□□□□ -0.85
TLR4-202ENST00000394487 RBM19Q9Y4C8 960 aaKnown RBP9.71□□□□□ -0.85
TLR4-202ENST00000394487 SENP3-EIF4A1A0A087X0R7 540 aa9.7□□□□□ -0.86
TLR4-202ENST00000394487 ANP32AP39687 249 aaKnown RBP9.67□□□□□ -0.86
TLR4-202ENST00000394487 FAM9BQ8IZU0 186 aa9.64□□□□□ -0.87
TLR4-202ENST00000394487 KCNH8Q96L42 1107 aa9.64□□□□□ -0.87
TLR4-202ENST00000394487 DEKP35659 375 aaKnown RBP9.64□□□□□ -0.87
TLR4-202ENST00000394487 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
TLR4-202ENST00000394487 CCDC136Q96JN2 1154 aa9.61□□□□□ -0.87
TLR4-202ENST00000394487 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
TLR4-202ENST00000394487 ARXQ96QS3 562 aa9.6□□□□□ -0.87
TLR4-202ENST00000394487 SALL2Q9Y467 1007 aaPredicted RBP9.58□□□□□ -0.88
TLR4-202ENST00000394487 ZNF326Q5BKZ1 582 aaKnown RBP9.58□□□□□ -0.88
TLR4-202ENST00000394487 B4GALNT3Q6L9W6 998 aa9.56□□□□□ -0.88
TLR4-202ENST00000394487 LAS1LQ9Y4W2 734 aaKnown RBP9.55□□□□□ -0.88
TLR4-202ENST00000394487 NACADO15069 1562 aa9.55□□□□□ -0.88
TLR4-202ENST00000394487 UNC13AQ9UPW8 1703 aa9.54□□□□□ -0.88
TLR4-202ENST00000394487 MYT1LQ9UL68 1186 aa9.54□□□□□ -0.88
TLR4-202ENST00000394487 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
TLR4-202ENST00000394487 CEP162Q5TB80 1403 aa9.52□□□□□ -0.89
TLR4-202ENST00000394487 SIN3AQ96ST3 1273 aa9.5□□□□□ -0.89
TLR4-202ENST00000394487 NOP58Q9Y2X3 529 aaKnown RBP9.5□□□□□ -0.89
TLR4-202ENST00000394487 PRKCSHP14314 528 aaPredicted RBP9.49□□□□□ -0.89
TLR4-202ENST00000394487 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
TLR4-202ENST00000394487 ANO8Q9HCE9 1232 aaPredicted RBP9.48□□□□□ -0.89
TLR4-202ENST00000394487 NEFMP07197 916 aa9.46□□□□□ -0.9
TLR4-202ENST00000394487 TONSLQ96HA7 1378 aa9.45□□□□□ -0.9
TLR4-202ENST00000394487 RSF1Q96T23 1441 aaPredicted RBP9.43□□□□□ -0.9
TLR4-202ENST00000394487 ARID3CA6NKF2 412 aa9.43□□□□□ -0.9
TLR4-202ENST00000394487 PABPN1Q86U42 306 aaKnown RBP eCLIP9.42□□□□□ -0.9
TLR4-202ENST00000394487 RB1CC1Q8TDY2 1594 aa9.42□□□□□ -0.9
TLR4-202ENST00000394487 PPP4R2Q9NY27 417 aa9.41□□□□□ -0.9
TLR4-202ENST00000394487 ABCC9O60706 1549 aa9.41□□□□□ -0.9
TLR4-202ENST00000394487 CLIP1P30622 1438 aa9.4□□□□□ -0.9
TLR4-202ENST00000394487 GLIPR1L2Q4G1C9 344 aa9.37□□□□□ -0.91
TLR4-202ENST00000394487 CHIC2Q9UKJ5 165 aa9.37□□□□□ -0.91
TLR4-202ENST00000394487 ARID4BQ4LE39 1312 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms