Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 TRIM53CP-201ENST00000531490 1354 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 DLEU2L-201ENST00000371086 3555 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 RN7SKP257-201ENST00000364525 309 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 MRPL32P1-201ENST00000406301 247 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AL663061.1-201ENST00000416625 580 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AL356133.1-201ENST00000444762 372 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 MTCYBP44-201ENST00000514835 823 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AC005393.1-201ENST00000617916 584 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AC012653.2-201ENST00000621880 420 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AC017037.4-201ENST00000624526 826 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AC073857.1-201ENST00000625082 1054 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 SNORA16A-202ENST00000628458 135 ntBASIC6.94□□□□□ -1.3
PCDH9Q9HC56 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH9Q9HC56 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AL731556.1-201ENST00000394628 3711 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 RNA5SP188-201ENST00000362916 129 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 CYCSP17-201ENST00000407870 315 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AC239367.3-201ENST00000428996 814 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 CHCHD4P5-201ENST00000436684 427 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AL133480.2-201ENST00000456723 487 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 EIF3LP2-201ENST00000457262 807 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 IGHV3-57-201ENST00000520143 280 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 IGLV3-6-201ENST00000523937 250 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 PPIAP6-201ENST00000557078 499 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AC244034.2-201ENST00000562504 509 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 Z93930.3-201ENST00000607919 749 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.93□□□□□ -1.3
PCDH9Q9HC56 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDH9Q9HC56 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 MTCO1P25-201ENST00000414449 1799 ntBASIC6.92□□□□□ -1.3
PCDH9Q9HC56 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDH9Q9HC56 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms