Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC011592.1-201ENST00000624647 3634 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 SLC20A1P1-201ENST00000413906 956 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 AL663061.1-201ENST00000416625 580 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 MTND6P12-201ENST00000428247 522 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 CDY8P-201ENST00000428380 1279 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 RPL23AP19-201ENST00000436229 369 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 CDY20P-201ENST00000447528 1279 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 RN7SL214P-201ENST00000487317 265 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC011352.2-201ENST00000514574 1016 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC020978.7-201ENST00000575953 1187 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC008521.2-201ENST00000591021 259 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC011445.2-201ENST00000599274 173 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 AL512624.1-201ENST00000613638 469 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC8□□□□□ -1.13
SNED1Q8TER0 MIR130B-202ENST00000385018 82 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
SNED1Q8TER0 AC017035.1-201ENST00000411999 1115 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 RPL23AP85-201ENST00000421838 433 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 CYP4F32P-201ENST00000426492 504 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 MED28P4-201ENST00000433137 572 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC8□□□□□ -1.13
SNED1Q8TER0 EMC3-AS1-205ENST00000438698 534 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8□□□□□ -1.13
SNED1Q8TER0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8□□□□□ -1.13
SNED1Q8TER0 RN7SL174P-201ENST00000475578 289 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC8□□□□□ -1.13
SNED1Q8TER0 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 MED21-206ENST00000546323 575 ntTSL 3 BASIC8□□□□□ -1.13
SNED1Q8TER0 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8□□□□□ -1.13
SNED1Q8TER0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 GTF2IP6-201ENST00000583143 541 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 AC004801.6-201ENST00000616571 978 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8□□□□□ -1.13
SNED1Q8TER0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC8□□□□□ -1.13
SNED1Q8TER0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8□□□□□ -1.13
SNED1Q8TER0 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8□□□□□ -1.13
SNED1Q8TER0 CIR1P2-201ENST00000514821 1342 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC8□□□□□ -1.13
SNED1Q8TER0 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 AC091305.2-201ENST00000624049 1576 ntBASIC8□□□□□ -1.13
SNED1Q8TER0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8□□□□□ -1.13
SNED1Q8TER0 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8□□□□□ -1.13
SNED1Q8TER0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8□□□□□ -1.13
SNED1Q8TER0 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms