Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
CDC42BPAQ5VT25 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 RNU1-150P-201ENST00000362491 162 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 RN7SKP292-201ENST00000365522 317 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AL096711.1-201ENST00000404780 554 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 DNAJA1P6-201ENST00000437347 354 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 ATP6V1E1P1-201ENST00000439215 681 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AC012653.2-201ENST00000621880 420 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AC009948.5-201ENST00000624360 4406 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 UBFD1P1-201ENST00000473259 814 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 CR383658.1-201ENST00000514609 734 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 RNA5SP434-201ENST00000516647 121 ntBASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 REV3L-214ENST00000619481 969 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42BPAQ5VT25 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 MTCO1P28-201ENST00000574177 1528 ntBASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 RN7SKP206-201ENST00000410823 293 ntBASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 RPS7P14-201ENST00000426405 583 ntBASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 AC003989.1-201ENST00000434569 565 ntBASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 RN7SKP238-201ENST00000516483 249 ntBASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 OR7E122P-202ENST00000641144 6171 ntBASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42BPAQ5VT25 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 RN7SKP144-201ENST00000411108 279 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC096537.2-201ENST00000413707 714 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 RPL12P12-201ENST00000424633 501 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC091390.2-201ENST00000432573 374 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC011411.1-201ENST00000509592 876 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC106872.4-201ENST00000510050 523 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 OTX2-203ENST00000554559 715 ntTSL 5 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC025171.4-201ENST00000607250 1047 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 RFPL4AP6-201ENST00000616792 846 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms