Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HTTP42858 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HTTP42858 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HTTP42858 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
HTTP42858 AL359513.1-201ENST00000614364 557 ntBASIC6.96□□□□□ -1.29
HTTP42858 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
HTTP42858 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HTTP42858 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HTTP42858 AC138915.4-201ENST00000565549 4147 ntBASIC6.96□□□□□ -1.29
HTTP42858 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
HTTP42858 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
HTTP42858 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HTTP42858 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.29
HTTP42858 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
HTTP42858 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
HTTP42858 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.96□□□□□ -1.3
HTTP42858 GABARAPL3-201ENST00000412799 354 ntBASIC6.96□□□□□ -1.3
HTTP42858 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.96□□□□□ -1.3
HTTP42858 WBP1LP3-201ENST00000523033 208 ntBASIC6.96□□□□□ -1.3
HTTP42858 AL008723.3-201ENST00000608926 449 ntBASIC6.96□□□□□ -1.3
HTTP42858 AC021766.1-201ENST00000624404 741 ntBASIC6.96□□□□□ -1.3
HTTP42858 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.96□□□□□ -1.3
HTTP42858 AP002833.3-201ENST00000625075 2265 ntBASIC6.96□□□□□ -1.3
HTTP42858 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.96□□□□□ -1.3
HTTP42858 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 AC011447.6-201ENST00000623510 2598 ntBASIC6.96□□□□□ -1.3
HTTP42858 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
HTTP42858 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC6.96□□□□□ -1.3
HTTP42858 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 NRAP-204ENST00000369360 5535 ntTSL 5 BASIC6.96□□□□□ -1.3
HTTP42858 WDR95P-201ENST00000425638 1542 ntBASIC6.96□□□□□ -1.3
HTTP42858 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
HTTP42858 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 AC127070.3-201ENST00000503695 3263 ntBASIC6.96□□□□□ -1.3
HTTP42858 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 Z68868.1-201ENST00000429048 544 ntBASIC6.96□□□□□ -1.3
HTTP42858 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.96□□□□□ -1.3
HTTP42858 RPS17P15-201ENST00000475609 349 ntBASIC6.96□□□□□ -1.3
HTTP42858 AC110775.1-201ENST00000513721 462 ntBASIC6.96□□□□□ -1.3
HTTP42858 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.96□□□□□ -1.3
HTTP42858 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.96□□□□□ -1.3
HTTP42858 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 THADA-202ENST00000402360 2974 ntTSL 5 BASIC6.96□□□□□ -1.3
HTTP42858 AL353763.2-201ENST00000623489 1903 ntBASIC6.96□□□□□ -1.3
HTTP42858 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
HTTP42858 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HTTP42858 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 MTCO1P25-201ENST00000414449 1799 ntBASIC6.95□□□□□ -1.3
HTTP42858 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.95□□□□□ -1.3
HTTP42858 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
HTTP42858 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.95□□□□□ -1.3
HTTP42858 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC6.95□□□□□ -1.3
HTTP42858 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 FAR2P2-201ENST00000413041 594 ntBASIC6.95□□□□□ -1.3
HTTP42858 FAR2P4-202ENST00000425399 584 ntBASIC6.95□□□□□ -1.3
HTTP42858 FAR2P1-206ENST00000449736 709 ntBASIC6.95□□□□□ -1.3
HTTP42858 AZGP1P2-201ENST00000454506 345 ntBASIC6.95□□□□□ -1.3
HTTP42858 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.95□□□□□ -1.3
HTTP42858 AC005244.1-201ENST00000582566 339 ntBASIC6.95□□□□□ -1.3
HTTP42858 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.95□□□□□ -1.3
HTTP42858 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC6.95□□□□□ -1.3
HTTP42858 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.95□□□□□ -1.3
HTTP42858 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.95□□□□□ -1.3
HTTP42858 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 SIAH1P1-201ENST00000479411 923 ntBASIC6.95□□□□□ -1.3
HTTP42858 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.95□□□□□ -1.3
HTTP42858 AC138866.2-201ENST00000508650 584 ntBASIC6.95□□□□□ -1.3
HTTP42858 RNA5SP92-201ENST00000516437 110 ntBASIC6.95□□□□□ -1.3
HTTP42858 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
HTTP42858 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.95□□□□□ -1.3
HTTP42858 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 TOGARAM1-202ENST00000361577 6247 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.95□□□□□ -1.3
HTTP42858 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.95□□□□□ -1.3
HTTP42858 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms