Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 RERE-203ENST00000400907 2973 ntTSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.49□□□□□ -1.37
CD40P25942 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD40P25942 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.49□□□□□ -1.37
CD40P25942 AC126773.4-201ENST00000612545 3043 ntBASIC6.49□□□□□ -1.37
CD40P25942 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 AL353795.1-201ENST00000439134 1775 ntBASIC6.49□□□□□ -1.37
CD40P25942 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 AC007938.1-201ENST00000562524 2902 ntBASIC6.49□□□□□ -1.37
CD40P25942 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CD40P25942 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD40P25942 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
CD40P25942 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.48□□□□□ -1.37
CD40P25942 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CD40P25942 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 AL078621.1-201ENST00000272567 768 ntBASIC6.48□□□□□ -1.37
CD40P25942 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CD40P25942 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CD40P25942 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 SNORD116-2-201ENST00000384274 95 ntBASIC6.48□□□□□ -1.37
CD40P25942 SNORD116-6-201ENST00000384711 96 ntBASIC6.48□□□□□ -1.37
CD40P25942 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CD40P25942 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 RN7SKP225-201ENST00000410405 352 ntBASIC6.48□□□□□ -1.37
CD40P25942 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 RPS26P13-201ENST00000419030 330 ntBASIC6.48□□□□□ -1.37
CD40P25942 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 OR2X1P-201ENST00000421144 687 ntBASIC6.48□□□□□ -1.37
CD40P25942 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 VN1R40P-201ENST00000455196 941 ntBASIC6.48□□□□□ -1.37
CD40P25942 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 AC018892.2-201ENST00000457656 693 ntBASIC6.48□□□□□ -1.37
CD40P25942 NDUFB4P1-201ENST00000462398 381 ntBASIC6.48□□□□□ -1.37
CD40P25942 RN7SL791P-201ENST00000467868 295 ntBASIC6.48□□□□□ -1.37
CD40P25942 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 NPY6R-201ENST00000503807 1112 ntBASIC6.48□□□□□ -1.37
CD40P25942 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AC010409.2-201ENST00000505780 478 ntBASIC6.48□□□□□ -1.37
CD40P25942 GOLGA5P1-201ENST00000507317 980 ntBASIC6.48□□□□□ -1.37
CD40P25942 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 CASP1P2-201ENST00000526830 1258 ntBASIC6.48□□□□□ -1.37
CD40P25942 AC103855.4-201ENST00000533158 265 ntBASIC6.48□□□□□ -1.37
CD40P25942 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 AC068790.1-201ENST00000536166 355 ntBASIC6.48□□□□□ -1.37
CD40P25942 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 AC068631.3-201ENST00000538831 225 ntBASIC6.48□□□□□ -1.37
CD40P25942 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AC025283.1-201ENST00000572039 734 ntBASIC6.48□□□□□ -1.37
CD40P25942 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 MIR4789-201ENST00000577469 82 ntBASIC6.48□□□□□ -1.37
CD40P25942 AC090774.2-201ENST00000584708 322 ntBASIC6.48□□□□□ -1.37
CD40P25942 RN7SL622P-201ENST00000585292 275 ntBASIC6.48□□□□□ -1.37
CD40P25942 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms