RNA–Protein interactions for RNA: ENST00000608080.1

LINC01440-205, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 3 BASIC

Gene LINC01440, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-205ENST00000608080 AEBP2Q6ZN18 517 aaPredicted RBP30.82■■■□□ 2.52
LINC01440-205ENST00000608080 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
LINC01440-205ENST00000608080 SENP3Q9H4L4 574 aaPredicted RBP26.48■■□□□ 1.83
LINC01440-205ENST00000608080 PHF23Q9BUL5 403 aaPredicted RBP26.02■■□□□ 1.76
LINC01440-205ENST00000608080 FOXD1Q16676 465 aa24.58■■□□□ 1.53
LINC01440-205ENST00000608080 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
LINC01440-205ENST00000608080 MSH5O43196 834 aa23.23■■□□□ 1.31
LINC01440-205ENST00000608080 PIAS4Q8N2W9 510 aaPredicted RBP23.01■■□□□ 1.27
LINC01440-205ENST00000608080 POTEDQ86YR6 584 aa22.88■■□□□ 1.25
LINC01440-205ENST00000608080 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
LINC01440-205ENST00000608080 ADRA2BP18089 450 aa22.72■■□□□ 1.23
LINC01440-205ENST00000608080 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
LINC01440-205ENST00000608080 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
LINC01440-205ENST00000608080 MAPK8IP2Q13387 824 aaPredicted RBP20.88■□□□□ 0.93
LINC01440-205ENST00000608080 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
LINC01440-205ENST00000608080 DCAF8L1A6NGE4 600 aa20.09■□□□□ 0.81
LINC01440-205ENST00000608080 HOXD11P31277 338 aaPredicted RBP20.08■□□□□ 0.81
LINC01440-205ENST00000608080 CNKSR2Q8WXI2 1034 aa20.05■□□□□ 0.8
LINC01440-205ENST00000608080 CACNB1Q02641 598 aaPredicted RBP19.99■□□□□ 0.79
LINC01440-205ENST00000608080 RNF216Q9NWF9 866 aaPredicted RBP19.92■□□□□ 0.78
LINC01440-205ENST00000608080 RNF39Q9H2S5 420 aa19.72■□□□□ 0.75
LINC01440-205ENST00000608080 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
LINC01440-205ENST00000608080 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
LINC01440-205ENST00000608080 C1QBPQ07021 282 aaKnown RBP19.48■□□□□ 0.71
LINC01440-205ENST00000608080 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
LINC01440-205ENST00000608080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.66
LINC01440-205ENST00000608080 U3KPZ7 1027 aaPredicted RBP18.69■□□□□ 0.58
LINC01440-205ENST00000608080 KCNA4P22459 653 aa18.62■□□□□ 0.57
LINC01440-205ENST00000608080 CAPN15O75808 1086 aa18.5■□□□□ 0.55
LINC01440-205ENST00000608080 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
LINC01440-205ENST00000608080 DSG3P32926 999 aa18.39■□□□□ 0.53
LINC01440-205ENST00000608080 APLP2Q06481 763 aa18.35■□□□□ 0.53
LINC01440-205ENST00000608080 SLC4A2P04920 1241 aa18.33■□□□□ 0.52
LINC01440-205ENST00000608080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
LINC01440-205ENST00000608080 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
LINC01440-205ENST00000608080 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
LINC01440-205ENST00000608080 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
LINC01440-205ENST00000608080 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
LINC01440-205ENST00000608080 ABCB7O75027 752 aa18■□□□□ 0.47
LINC01440-205ENST00000608080 POTEHQ6S545 545 aa17.93■□□□□ 0.46
LINC01440-205ENST00000608080 MYCNP04198 464 aaPredicted RBP17.85■□□□□ 0.45
LINC01440-205ENST00000608080 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
LINC01440-205ENST00000608080 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
LINC01440-205ENST00000608080 POLA2Q14181 598 aa17.57■□□□□ 0.4
LINC01440-205ENST00000608080 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
LINC01440-205ENST00000608080 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
LINC01440-205ENST00000608080 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
LINC01440-205ENST00000608080 CHRDL2Q6WN34 429 aa17.28■□□□□ 0.36
LINC01440-205ENST00000608080 AKT1S1Q96B36 256 aa17.18■□□□□ 0.34
LINC01440-205ENST00000608080 ZBTB22O15209 634 aa17.07■□□□□ 0.32
LINC01440-205ENST00000608080 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
LINC01440-205ENST00000608080 ATXN8OSP0DMR3 200 aa17.05■□□□□ 0.32
LINC01440-205ENST00000608080 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
LINC01440-205ENST00000608080 FBLN2P98095 1184 aa16.82■□□□□ 0.28
LINC01440-205ENST00000608080 PIP4P2Q8N4L2 257 aa16.8■□□□□ 0.28
LINC01440-205ENST00000608080 PITPNM1O00562 1244 aa16.79■□□□□ 0.28
LINC01440-205ENST00000608080 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
LINC01440-205ENST00000608080 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
LINC01440-205ENST00000608080 SPDYE2Q495Y8 402 aa16.75■□□□□ 0.27
LINC01440-205ENST00000608080 SP7Q8TDD2 431 aaPredicted RBP16.74■□□□□ 0.27
LINC01440-205ENST00000608080 FXR2P51116 673 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC01440-205ENST00000608080 HAX1O00165 279 aa16.56■□□□□ 0.24
LINC01440-205ENST00000608080 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
LINC01440-205ENST00000608080 SPDYE1Q8NFV5 336 aaPredicted RBP16.5■□□□□ 0.23
LINC01440-205ENST00000608080 ZNF692Q9BU19 519 aaPredicted RBP16.48■□□□□ 0.23
LINC01440-205ENST00000608080 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
LINC01440-205ENST00000608080 CLEC11AQ9Y240 323 aa16.44■□□□□ 0.22
LINC01440-205ENST00000608080 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
LINC01440-205ENST00000608080 EVX2Q03828 476 aa16.21■□□□□ 0.19
LINC01440-205ENST00000608080 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC01440-205ENST00000608080 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
LINC01440-205ENST00000608080 PRR29P0C7W0 189 aa16.16■□□□□ 0.18
LINC01440-205ENST00000608080 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
LINC01440-205ENST00000608080 CHADLQ6NUI6 762 aa16.09■□□□□ 0.17
LINC01440-205ENST00000608080 GABBR2O75899 941 aa15.95■□□□□ 0.14
LINC01440-205ENST00000608080 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
LINC01440-205ENST00000608080 FARP1Q9Y4F1 1045 aaPredicted RBP15.87■□□□□ 0.13
LINC01440-205ENST00000608080 CD44P16070 742 aaKnown RBP15.85■□□□□ 0.13
LINC01440-205ENST00000608080 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
LINC01440-205ENST00000608080 CLCN6P51797 869 aa15.79■□□□□ 0.12
LINC01440-205ENST00000608080 SPDYE4A6NLX3 237 aa15.72■□□□□ 0.11
LINC01440-205ENST00000608080 LHX8Q68G74 356 aa15.68■□□□□ 0.1
LINC01440-205ENST00000608080 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
LINC01440-205ENST00000608080 ZNF579Q8NAF0 562 aaKnown RBP15.61■□□□□ 0.09
LINC01440-205ENST00000608080 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
LINC01440-205ENST00000608080 POTEIP0CG38 1075 aa15.54■□□□□ 0.08
LINC01440-205ENST00000608080 DCBLD2Q96PD2 775 aa15.54■□□□□ 0.08
LINC01440-205ENST00000608080 PAK3O75914 559 aaPredicted RBP15.53■□□□□ 0.08
LINC01440-205ENST00000608080 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC01440-205ENST00000608080 GALR2O43603 387 aaPredicted RBP15.37■□□□□ 0.05
LINC01440-205ENST00000608080 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
LINC01440-205ENST00000608080 PHF12Q96QT6 1004 aa15.3■□□□□ 0.04
LINC01440-205ENST00000608080 PROM2Q8N271 834 aa15.29■□□□□ 0.04
LINC01440-205ENST00000608080 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
LINC01440-205ENST00000608080 MS4A3Q96HJ5 214 aa15.13■□□□□ 0.01
LINC01440-205ENST00000608080 ASTLQ6HA08 431 aaPredicted RBP15.09■□□□□ 0.01
LINC01440-205ENST00000608080 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
LINC01440-205ENST00000608080 OTUD5Q96G74 571 aa15.05■□□□□ -0
LINC01440-205ENST00000608080 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
LINC01440-205ENST00000608080 SLC39A7Q92504 469 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms