RNA–Protein interactions for RNA: ENST00000417989.1

LINC01065-201, Transcript of long intergenic non-protein coding RNA 1065, humanhuman

TSL 3 BASIC

Gene LINC01065, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01065-201ENST00000417989 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
LINC01065-201ENST00000417989 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
LINC01065-201ENST00000417989 SENP3Q9H4L4 574 aaPredicted RBP24.91■■□□□ 1.58
LINC01065-201ENST00000417989 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
LINC01065-201ENST00000417989 FOXD1Q16676 465 aa23.21■■□□□ 1.31
LINC01065-201ENST00000417989 PLPPR3Q6T4P5 718 aa22.73■■□□□ 1.23
LINC01065-201ENST00000417989 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
LINC01065-201ENST00000417989 ADRA2BP18089 450 aa21.98■■□□□ 1.11
LINC01065-201ENST00000417989 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
LINC01065-201ENST00000417989 MSH5O43196 834 aa21.51■■□□□ 1.03
LINC01065-201ENST00000417989 POTEDQ86YR6 584 aa20.32■□□□□ 0.84
LINC01065-201ENST00000417989 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
LINC01065-201ENST00000417989 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
LINC01065-201ENST00000417989 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
LINC01065-201ENST00000417989 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
LINC01065-201ENST00000417989 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
LINC01065-201ENST00000417989 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
LINC01065-201ENST00000417989 HOXD11P31277 338 aaPredicted RBP19.28■□□□□ 0.68
LINC01065-201ENST00000417989 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
LINC01065-201ENST00000417989 KCNA4P22459 653 aa19.1■□□□□ 0.65
LINC01065-201ENST00000417989 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
LINC01065-201ENST00000417989 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
LINC01065-201ENST00000417989 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
LINC01065-201ENST00000417989 RNF39Q9H2S5 420 aa18.42■□□□□ 0.54
LINC01065-201ENST00000417989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
LINC01065-201ENST00000417989 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
LINC01065-201ENST00000417989 C1QBPQ07021 282 aaKnown RBP18.16■□□□□ 0.5
LINC01065-201ENST00000417989 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
LINC01065-201ENST00000417989 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
LINC01065-201ENST00000417989 U3KPZ7 1027 aaPredicted RBP18.04■□□□□ 0.48
LINC01065-201ENST00000417989 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
LINC01065-201ENST00000417989 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
LINC01065-201ENST00000417989 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
LINC01065-201ENST00000417989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.61■□□□□ 0.41
LINC01065-201ENST00000417989 HNRNPUL2Q1KMD3 747 aaKnown RBP17.61■□□□□ 0.41
LINC01065-201ENST00000417989 ZBTB22O15209 634 aa17.59■□□□□ 0.41
LINC01065-201ENST00000417989 CAPN15O75808 1086 aa17.57■□□□□ 0.4
LINC01065-201ENST00000417989 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
LINC01065-201ENST00000417989 APLP2Q06481 763 aa17.51■□□□□ 0.39
LINC01065-201ENST00000417989 DSG3P32926 999 aa17.4■□□□□ 0.38
LINC01065-201ENST00000417989 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
LINC01065-201ENST00000417989 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
LINC01065-201ENST00000417989 ABCB7O75027 752 aa17.22■□□□□ 0.35
LINC01065-201ENST00000417989 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
LINC01065-201ENST00000417989 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
LINC01065-201ENST00000417989 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
LINC01065-201ENST00000417989 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
LINC01065-201ENST00000417989 POLA2Q14181 598 aa17.03■□□□□ 0.32
LINC01065-201ENST00000417989 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
LINC01065-201ENST00000417989 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
LINC01065-201ENST00000417989 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
LINC01065-201ENST00000417989 FBLN2P98095 1184 aa16.46■□□□□ 0.23
LINC01065-201ENST00000417989 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.23
LINC01065-201ENST00000417989 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
LINC01065-201ENST00000417989 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
LINC01065-201ENST00000417989 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
LINC01065-201ENST00000417989 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
LINC01065-201ENST00000417989 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
LINC01065-201ENST00000417989 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
LINC01065-201ENST00000417989 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
LINC01065-201ENST00000417989 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
LINC01065-201ENST00000417989 POTEHQ6S545 545 aa15.99■□□□□ 0.15
LINC01065-201ENST00000417989 PITPNM1O00562 1244 aa15.96■□□□□ 0.15
LINC01065-201ENST00000417989 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
LINC01065-201ENST00000417989 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
LINC01065-201ENST00000417989 SPDYE1Q8NFV5 336 aaPredicted RBP15.84■□□□□ 0.13
LINC01065-201ENST00000417989 CLEC11AQ9Y240 323 aa15.79■□□□□ 0.12
LINC01065-201ENST00000417989 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
LINC01065-201ENST00000417989 FXR2P51116 673 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC01065-201ENST00000417989 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
LINC01065-201ENST00000417989 PROM2Q8N271 834 aa15.57■□□□□ 0.08
LINC01065-201ENST00000417989 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
LINC01065-201ENST00000417989 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
LINC01065-201ENST00000417989 FKBP8Q14318 412 aa15.5■□□□□ 0.07
LINC01065-201ENST00000417989 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
LINC01065-201ENST00000417989 HAX1O00165 279 aa15.34■□□□□ 0.05
LINC01065-201ENST00000417989 CREBZFQ9NS37 354 aa15.33■□□□□ 0.04
LINC01065-201ENST00000417989 FARP1Q9Y4F1 1045 aaPredicted RBP15.28■□□□□ 0.04
LINC01065-201ENST00000417989 EVX2Q03828 476 aa15.23■□□□□ 0.03
LINC01065-201ENST00000417989 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
LINC01065-201ENST00000417989 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
LINC01065-201ENST00000417989 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
LINC01065-201ENST00000417989 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
LINC01065-201ENST00000417989 MIER1Q8N108 512 aa15.06■□□□□ 0
LINC01065-201ENST00000417989 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
LINC01065-201ENST00000417989 FBXO3Q9UK99 471 aa15.02■□□□□ -0
LINC01065-201ENST00000417989 PLCD3Q8N3E9 789 aa14.99□□□□□ -0.01
LINC01065-201ENST00000417989 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
LINC01065-201ENST00000417989 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
LINC01065-201ENST00000417989 GABBR2O75899 941 aa14.89□□□□□ -0.03
LINC01065-201ENST00000417989 VASPP50552 380 aaPredicted RBP14.87□□□□□ -0.03
LINC01065-201ENST00000417989 ZNF579Q8NAF0 562 aaKnown RBP14.87□□□□□ -0.03
LINC01065-201ENST00000417989 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
LINC01065-201ENST00000417989 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
LINC01065-201ENST00000417989 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
LINC01065-201ENST00000417989 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
LINC01065-201ENST00000417989 PHF12Q96QT6 1004 aa14.77□□□□□ -0.05
LINC01065-201ENST00000417989 CLCN6P51797 869 aa14.76□□□□□ -0.05
LINC01065-201ENST00000417989 NUBP1P53384 320 aa14.76□□□□□ -0.05
LINC01065-201ENST00000417989 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms