Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
RB1P06400 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.26□□□□□ -1.25
RB1P06400 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
RB1P06400 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 RN7SKP47-201ENST00000365347 328 ntBASIC7.26□□□□□ -1.25
RB1P06400 RNU1-55P-201ENST00000365510 158 ntBASIC7.26□□□□□ -1.25
RB1P06400 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.26□□□□□ -1.25
RB1P06400 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.26□□□□□ -1.25
RB1P06400 VN1R20P-201ENST00000425215 966 ntBASIC7.26□□□□□ -1.25
RB1P06400 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.26□□□□□ -1.25
RB1P06400 AC069154.1-201ENST00000432914 542 ntBASIC7.26□□□□□ -1.25
RB1P06400 AC007679.3-201ENST00000434035 414 ntBASIC7.26□□□□□ -1.25
RB1P06400 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.26□□□□□ -1.25
RB1P06400 GAPDHP59-201ENST00000435908 267 ntBASIC7.26□□□□□ -1.25
RB1P06400 OR2AF1P-201ENST00000454899 889 ntBASIC7.26□□□□□ -1.25
RB1P06400 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 RN7SL870P-201ENST00000460111 296 ntBASIC7.26□□□□□ -1.25
RB1P06400 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 NDUFA5P5-201ENST00000468361 342 ntBASIC7.26□□□□□ -1.25
RB1P06400 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC7.26□□□□□ -1.25
RB1P06400 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 TRIM51DP-201ENST00000529746 596 ntBASIC7.26□□□□□ -1.25
RB1P06400 OR4A1P-201ENST00000532342 920 ntBASIC7.26□□□□□ -1.25
RB1P06400 SAA3P-201ENST00000533267 365 ntBASIC7.26□□□□□ -1.25
RB1P06400 AC140063.1-201ENST00000541343 259 ntBASIC7.26□□□□□ -1.25
RB1P06400 RPL41P2-201ENST00000544920 409 ntBASIC7.26□□□□□ -1.25
RB1P06400 AC002519.2-203ENST00000567043 837 ntBASIC7.26□□□□□ -1.25
RB1P06400 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.26□□□□□ -1.25
RB1P06400 AL589765.6-201ENST00000601909 549 ntBASIC7.26□□□□□ -1.25
RB1P06400 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.26□□□□□ -1.25
RB1P06400 AL122023.1-201ENST00000622847 530 ntBASIC7.26□□□□□ -1.25
RB1P06400 AC025262.3-201ENST00000623666 360 ntBASIC7.26□□□□□ -1.25
RB1P06400 AC114546.4-201ENST00000624413 369 ntBASIC7.26□□□□□ -1.25
RB1P06400 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 MAPK10-377ENST00000642006 2752 ntBASIC7.26□□□□□ -1.25
RB1P06400 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.26□□□□□ -1.25
RB1P06400 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.26□□□□□ -1.25
RB1P06400 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.26□□□□□ -1.25
RB1P06400 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.26□□□□□ -1.25
RB1P06400 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
RB1P06400 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.25□□□□□ -1.25
RB1P06400 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
RB1P06400 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.25□□□□□ -1.25
RB1P06400 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RB1P06400 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.25□□□□□ -1.25
RB1P06400 FABP5P1-201ENST00000423401 411 ntBASIC7.25□□□□□ -1.25
RB1P06400 NAP1L4P2-201ENST00000425958 899 ntBASIC7.25□□□□□ -1.25
RB1P06400 AC115283.1-201ENST00000427353 400 ntBASIC7.25□□□□□ -1.25
RB1P06400 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 PFN1P11-201ENST00000445829 389 ntBASIC7.25□□□□□ -1.25
RB1P06400 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.25□□□□□ -1.25
RB1P06400 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 AC135983.3-201ENST00000528049 1226 ntBASIC7.25□□□□□ -1.25
RB1P06400 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.25□□□□□ -1.25
RB1P06400 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.25□□□□□ -1.25
RB1P06400 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.25□□□□□ -1.25
RB1P06400 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.25□□□□□ -1.25
RB1P06400 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
RB1P06400 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.25□□□□□ -1.25
RB1P06400 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.25□□□□□ -1.25
RB1P06400 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.25□□□□□ -1.25
RB1P06400 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC7.25□□□□□ -1.25
RB1P06400 AL035410.2-201ENST00000604963 864 ntBASIC7.25□□□□□ -1.25
RB1P06400 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.25□□□□□ -1.25
RB1P06400 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms