Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.43■■□□□ 1.5
TNFRSF11AQ9Y6Q6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC133681.1-201ENST00000465482 601 ntBASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNFRSF11AQ9Y6Q6 LINC01521-201ENST00000504184 1943 ntBASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC018553.1-201ENST00000616682 1458 ntBASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 USP36-216ENST00000589424 970 ntTSL 5 BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC116351.2-201ENST00000606540 1585 ntBASIC24.41■■□□□ 1.5
TNFRSF11AQ9Y6Q6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC093827.2-201ENST00000512654 315 ntBASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 TFP1-202ENST00000475455 1573 ntBASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TNFRSF11AQ9Y6Q6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 TCF3P1-201ENST00000423021 1937 ntBASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TNFRSF11AQ9Y6Q6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24.39■■□□□ 1.49
TNFRSF11AQ9Y6Q6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
TNFRSF11AQ9Y6Q6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TNFRSF11AQ9Y6Q6 Z99916.2-201ENST00000604037 246 ntBASIC24.39■■□□□ 1.49
TNFRSF11AQ9Y6Q6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.39■■□□□ 1.49
TNFRSF11AQ9Y6Q6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms