Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC6Q9Y625 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC6Q9Y625 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.75■□□□□ 0.59
GPC6Q9Y625 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.75■□□□□ 0.59
GPC6Q9Y625 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GPC6Q9Y625 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
GPC6Q9Y625 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.75■□□□□ 0.59
GPC6Q9Y625 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.75■□□□□ 0.59
GPC6Q9Y625 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 AL162412.1-201ENST00000567129 965 ntBASIC18.75■□□□□ 0.59
GPC6Q9Y625 AL591742.1-201ENST00000604433 565 ntBASIC18.75■□□□□ 0.59
GPC6Q9Y625 AC080038.1-201ENST00000611274 1154 ntBASIC18.75■□□□□ 0.59
GPC6Q9Y625 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC6Q9Y625 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
GPC6Q9Y625 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.74■□□□□ 0.59
GPC6Q9Y625 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.74■□□□□ 0.59
GPC6Q9Y625 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.74■□□□□ 0.59
GPC6Q9Y625 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.74■□□□□ 0.59
GPC6Q9Y625 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GPC6Q9Y625 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GPC6Q9Y625 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GPC6Q9Y625 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC6Q9Y625 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GPC6Q9Y625 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.73■□□□□ 0.59
GPC6Q9Y625 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 AC007322.1-201ENST00000426983 750 ntBASIC18.73■□□□□ 0.59
GPC6Q9Y625 CNN2P6-201ENST00000439038 900 ntBASIC18.73■□□□□ 0.59
GPC6Q9Y625 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.73■□□□□ 0.59
GPC6Q9Y625 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.73■□□□□ 0.59
GPC6Q9Y625 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 AC087633.2-202ENST00000565166 1439 ntBASIC18.73■□□□□ 0.59
GPC6Q9Y625 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GPC6Q9Y625 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 AC098818.2-201ENST00000564925 2320 ntBASIC18.72■□□□□ 0.59
GPC6Q9Y625 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 PGM5P4-201ENST00000421970 445 ntBASIC18.72■□□□□ 0.59
GPC6Q9Y625 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms