Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 AC117947.1-201ENST00000427448 529 ntBASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CDC42BPBQ9Y5S2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC30.26■■■□□ 2.44
CDC42BPBQ9Y5S2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CDC42BPBQ9Y5S2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDC42BPBQ9Y5S2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 AK4P3-201ENST00000418260 669 ntBASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 EGLN1P1-201ENST00000531623 762 ntBASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 AC087388.1-201ENST00000571370 1112 ntBASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 AC096733.2-201ENST00000609937 1394 ntBASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 AC018553.1-201ENST00000616682 1458 ntBASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 GOLGA6L3-201ENST00000507199 1679 ntBASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.25■■■□□ 2.43
CDC42BPBQ9Y5S2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 AC128688.1-201ENST00000487626 519 ntBASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDC42BPBQ9Y5S2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 LIN28AP1-201ENST00000429574 405 ntBASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 FEM1AP4-201ENST00000443167 1987 ntBASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
CDC42BPBQ9Y5S2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 CRYGFP-201ENST00000418459 633 ntBASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 HIST1H2APS4-201ENST00000362070 348 ntBASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.22■■■□□ 2.43
CDC42BPBQ9Y5S2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms