Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
UBE2D4Q9Y2X8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.83□□□□□ -0.2
UBE2D4Q9Y2X8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 AC087633.2-202ENST00000565166 1439 ntBASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 AC093503.3-201ENST00000624917 2352 ntBASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 AC120498.9-201ENST00000339021 3867 ntBASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.82□□□□□ -0.2
UBE2D4Q9Y2X8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 AC019069.1-201ENST00000610008 1333 ntBASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBE2D4Q9Y2X8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms