Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 AC005332.7-201ENST00000614046 2005 ntBASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 AC007322.3-201ENST00000426526 701 ntBASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 AC006015.1-201ENST00000429970 570 ntBASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 AL591742.1-201ENST00000604433 565 ntBASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 BID-214ENST00000617586 542 ntTSL 5 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HHLA3Q9XRX5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 AC138932.1-201ENST00000534164 6830 ntBASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 AC093503.3-201ENST00000624917 2352 ntBASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 AC011767.1-201ENST00000617410 1153 ntBASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 AC013268.1-206ENST00000638368 961 ntBASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 AC112229.1-201ENST00000639295 961 ntBASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HHLA3Q9XRX5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 FP700111.2-201ENST00000619190 1892 ntBASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms