Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 AP000347.1-202ENST00000435868 847 ntBASIC21.23■□□□□ 0.99
CHD7Q9P2D1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 HMGA1P5-201ENST00000412453 271 ntBASIC21.22■□□□□ 0.99
CHD7Q9P2D1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHD7Q9P2D1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.21■□□□□ 0.99
CHD7Q9P2D1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CHD7Q9P2D1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CHD7Q9P2D1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.2■□□□□ 0.98
CHD7Q9P2D1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 AC069148.1-201ENST00000608741 768 ntBASIC21.2■□□□□ 0.98
CHD7Q9P2D1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD7Q9P2D1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD7Q9P2D1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD7Q9P2D1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 AC096733.2-201ENST00000609937 1394 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms