Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 AC211429.1-201ENST00000415277 523 ntBASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 BX088651.1-201ENST00000540551 451 ntBASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.91■□□□□ 0.94
ATXN3LQ9H3M9 AL157384.1-201ENST00000445995 2473 ntBASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 FP700111.2-201ENST00000619190 1892 ntBASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 PTBP1P-201ENST00000554374 1601 ntBASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 KRT8P20-201ENST00000423953 1409 ntBASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 HTR7P1-201ENST00000538670 1336 ntBASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 KRT16P5-201ENST00000455284 522 ntBASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3LQ9H3M9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN3LQ9H3M9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN3LQ9H3M9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.89■□□□□ 0.94
ATXN3LQ9H3M9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
ATXN3LQ9H3M9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3LQ9H3M9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 AL031963.3-201ENST00000606441 850 ntBASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3LQ9H3M9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms