Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 AC016405.3-201ENST00000607710 860 ntBASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 KRT16P6-202ENST00000425692 1426 ntBASIC21.55■■□□□ 1.04
NUCKS1Q9H1E3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 ID1-201ENST00000376105 1233 ntBASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.54■■□□□ 1.04
NUCKS1Q9H1E3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 RARRES2P4-201ENST00000514074 484 ntBASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.53■■□□□ 1.04
NUCKS1Q9H1E3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 HLA-L-209ENST00000420110 1011 ntBASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 CYP2T1P-201ENST00000432607 1285 ntBASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 NCF1B-203ENST00000435988 1254 ntBASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 AL031963.3-201ENST00000606441 850 ntBASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
NUCKS1Q9H1E3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NUCKS1Q9H1E3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
NUCKS1Q9H1E3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.52■■□□□ 1.03
NUCKS1Q9H1E3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 KRT8P20-201ENST00000423953 1409 ntBASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 AC018445.3-201ENST00000624177 1945 ntBASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUCKS1Q9H1E3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 AC005332.7-201ENST00000614046 2005 ntBASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUCKS1Q9H1E3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 AP001271.2-201ENST00000624018 1556 ntBASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUCKS1Q9H1E3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms