Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLIRPQ9GZT3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.51■□□□□ 0.39
SLIRPQ9GZT3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLIRPQ9GZT3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 AC139713.2-201ENST00000641328 2723 ntBASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 KRT8P36-201ENST00000489121 1440 ntBASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 TSPY13P-201ENST00000338964 914 ntBASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLIRPQ9GZT3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 RARRES2P11-201ENST00000635158 484 ntBASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 AC067852.2-201ENST00000590513 2313 ntBASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 AL031598.1-201ENST00000561511 1773 ntBASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SLIRPQ9GZT3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLIRPQ9GZT3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms