Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 AC093503.3-201ENST00000624917 2352 ntBASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 NEFHP1-201ENST00000412845 2629 ntBASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 AL031848.2-201ENST00000607670 837 ntBASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 Z82202.1-201ENST00000623446 1880 ntBASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 FLJ16779-201ENST00000612722 7638 ntBASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LCE3DQ9BYE3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms