Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.21■■□□□ 1.47
RPAP1Q9BWH6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RPAP1Q9BWH6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RPAP1Q9BWH6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RPAP1Q9BWH6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.21■■□□□ 1.47
RPAP1Q9BWH6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC24.21■■□□□ 1.47
RPAP1Q9BWH6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
RPAP1Q9BWH6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RPAP1Q9BWH6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 AL023875.1-201ENST00000640777 796 ntBASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPAP1Q9BWH6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 AL049637.2-201ENST00000641778 930 ntBASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 AL135905.2-201ENST00000584934 1404 ntBASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RPAP1Q9BWH6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 AC110285.5-201ENST00000611501 352 ntBASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.17■■□□□ 1.46
RPAP1Q9BWH6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 BX088651.1-201ENST00000540551 451 ntBASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.16■■□□□ 1.46
RPAP1Q9BWH6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms