Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CPNE1Q99829 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.87■□□□□ 0.77
CPNE1Q99829 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 AC069236.1-201ENST00000604339 616 ntBASIC19.87■□□□□ 0.77
CPNE1Q99829 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE1Q99829 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.86■□□□□ 0.77
CPNE1Q99829 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPNE1Q99829 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE1Q99829 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE1Q99829 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE1Q99829 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CPNE1Q99829 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 AC006015.1-201ENST00000429970 570 ntBASIC19.86■□□□□ 0.77
CPNE1Q99829 CYP2T1P-201ENST00000432607 1285 ntBASIC19.86■□□□□ 0.77
CPNE1Q99829 AC011767.1-201ENST00000617410 1153 ntBASIC19.86■□□□□ 0.77
CPNE1Q99829 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CPNE1Q99829 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.86■□□□□ 0.77
CPNE1Q99829 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE1Q99829 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE1Q99829 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE1Q99829 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE1Q99829 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPNE1Q99829 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 HLA-G-202ENST00000376815 851 ntBASIC19.85■□□□□ 0.77
CPNE1Q99829 HLA-G-203ENST00000376818 1127 ntBASIC19.85■□□□□ 0.77
CPNE1Q99829 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.85■□□□□ 0.77
CPNE1Q99829 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.85■□□□□ 0.77
CPNE1Q99829 AC008694.1-202ENST00000636953 945 ntBASIC19.85■□□□□ 0.77
CPNE1Q99829 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE1Q99829 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE1Q99829 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE1Q99829 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE1Q99829 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CPNE1Q99829 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CPNE1Q99829 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CPNE1Q99829 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CPNE1Q99829 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE1Q99829 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CPNE1Q99829 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CPNE1Q99829 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE1Q99829 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.84■□□□□ 0.77
CPNE1Q99829 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE1Q99829 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE1Q99829 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE1Q99829 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE1Q99829 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE1Q99829 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE1Q99829 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CPNE1Q99829 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.83■□□□□ 0.77
CPNE1Q99829 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.83■□□□□ 0.77
CPNE1Q99829 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE1Q99829 AC231657.2-201ENST00000624556 255 ntBASIC19.83■□□□□ 0.77
CPNE1Q99829 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CPNE1Q99829 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE1Q99829 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.83■□□□□ 0.76
CPNE1Q99829 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.83■□□□□ 0.76
CPNE1Q99829 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE1Q99829 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.83■□□□□ 0.76
CPNE1Q99829 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE1Q99829 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE1Q99829 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CPNE1Q99829 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms