Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 C1orf229-201ENST00000623686 2258 ntBASIC19.03■□□□□ 0.64
CNTNAP3BQ96NU0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 SLC25A24-204ENST00000569674 2357 ntBASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 MESTP1-201ENST00000404287 994 ntBASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP3BQ96NU0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP3BQ96NU0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP3BQ96NU0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.02■□□□□ 0.63
CNTNAP3BQ96NU0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP3BQ96NU0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP3BQ96NU0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 AL671883.3-201ENST00000603274 991 ntBASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3BQ96NU0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 ANKRD20A18P-201ENST00000359341 492 ntBASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3BQ96NU0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 FSCN1P1-201ENST00000568912 1481 ntBASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms