Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 IER3-202ENST00000376377 1350 ntBASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM43Q96BQ3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM43Q96BQ3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
TRIM43Q96BQ3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRIM43Q96BQ3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 RCC2P6-201ENST00000526625 1557 ntBASIC21.7■■□□□ 1.06
TRIM43Q96BQ3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 AC141257.4-201ENST00000634557 245 ntBASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 AC136944.6-201ENST00000634818 245 ntBASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM43Q96BQ3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 AC007663.1-201ENST00000438948 1240 ntBASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 MFAP1P1-201ENST00000442257 1255 ntBASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 AC011298.2-201ENST00000617989 482 ntBASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 KRT8P17-201ENST00000453110 1448 ntBASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM43Q96BQ3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 CCR12P-201ENST00000446203 998 ntBASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 KRT18P16-201ENST00000510337 1294 ntBASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 CLEC4GP1-201ENST00000596555 870 ntBASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM43Q96BQ3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms