Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE4Q96A23 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE4Q96A23 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE4Q96A23 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE4Q96A23 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE4Q96A23 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE4Q96A23 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE4Q96A23 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CPNE4Q96A23 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.83■□□□□ 0.45
CPNE4Q96A23 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE4Q96A23 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.83■□□□□ 0.45
CPNE4Q96A23 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.83■□□□□ 0.45
CPNE4Q96A23 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE4Q96A23 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE4Q96A23 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE4Q96A23 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE4Q96A23 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 AC128676.1-201ENST00000454392 318 ntBASIC17.83■□□□□ 0.44
CPNE4Q96A23 RPS2P52-201ENST00000469610 820 ntBASIC17.83■□□□□ 0.44
CPNE4Q96A23 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE4Q96A23 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE4Q96A23 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 AC069544.1-201ENST00000609399 999 ntBASIC17.83■□□□□ 0.44
CPNE4Q96A23 AL121906.2-201ENST00000621597 723 ntBASIC17.83■□□□□ 0.44
CPNE4Q96A23 AC073648.6-201ENST00000641589 218 ntBASIC17.83■□□□□ 0.44
CPNE4Q96A23 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CPNE4Q96A23 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE4Q96A23 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE4Q96A23 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE4Q96A23 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CPNE4Q96A23 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CPNE4Q96A23 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE4Q96A23 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE4Q96A23 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.82■□□□□ 0.44
CPNE4Q96A23 BX119927.1-201ENST00000636596 1552 ntBASIC17.82■□□□□ 0.44
CPNE4Q96A23 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CPNE4Q96A23 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE4Q96A23 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 AL512408.1-201ENST00000569378 2000 ntBASIC17.81■□□□□ 0.44
CPNE4Q96A23 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 TMEM191A-211ENST00000637163 1067 ntBASIC17.81■□□□□ 0.44
CPNE4Q96A23 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE4Q96A23 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE4Q96A23 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE4Q96A23 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE4Q96A23 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE4Q96A23 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE4Q96A23 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE4Q96A23 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE4Q96A23 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.8■□□□□ 0.44
CPNE4Q96A23 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE4Q96A23 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE4Q96A23 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE4Q96A23 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CPNE4Q96A23 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CPNE4Q96A23 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms