Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
USP6NLQ92738 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
USP6NLQ92738 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.6■■□□□ 1.21
USP6NLQ92738 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
USP6NLQ92738 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
USP6NLQ92738 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.59■■□□□ 1.21
USP6NLQ92738 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 AC011506.1-201ENST00000474329 610 ntBASIC22.59■■□□□ 1.21
USP6NLQ92738 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.59■■□□□ 1.21
USP6NLQ92738 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
USP6NLQ92738 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.59■■□□□ 1.21
USP6NLQ92738 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
USP6NLQ92738 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.59■■□□□ 1.21
USP6NLQ92738 DGCR10-201ENST00000609839 495 ntBASIC22.59■■□□□ 1.21
USP6NLQ92738 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.59■■□□□ 1.21
USP6NLQ92738 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
USP6NLQ92738 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.59■■□□□ 1.21
USP6NLQ92738 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.59■■□□□ 1.21
USP6NLQ92738 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
USP6NLQ92738 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP6NLQ92738 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.59■■□□□ 1.21
USP6NLQ92738 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP6NLQ92738 KRT8P17-201ENST00000453110 1448 ntBASIC22.58■■□□□ 1.21
USP6NLQ92738 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.58■■□□□ 1.21
USP6NLQ92738 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.58■■□□□ 1.21
USP6NLQ92738 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
USP6NLQ92738 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP6NLQ92738 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.58■■□□□ 1.21
USP6NLQ92738 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
USP6NLQ92738 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP6NLQ92738 ECEL1P2-202ENST00000465689 757 ntBASIC22.58■■□□□ 1.21
USP6NLQ92738 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
USP6NLQ92738 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.58■■□□□ 1.21
USP6NLQ92738 C2orf69P3-201ENST00000565542 1120 ntBASIC22.58■■□□□ 1.21
USP6NLQ92738 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.58■■□□□ 1.21
USP6NLQ92738 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.58■■□□□ 1.21
USP6NLQ92738 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP6NLQ92738 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.58■■□□□ 1.21
USP6NLQ92738 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
USP6NLQ92738 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
USP6NLQ92738 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP6NLQ92738 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6NLQ92738 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6NLQ92738 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6NLQ92738 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.57■■□□□ 1.2
USP6NLQ92738 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6NLQ92738 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.57■■□□□ 1.2
USP6NLQ92738 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.57■■□□□ 1.2
USP6NLQ92738 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.57■■□□□ 1.2
USP6NLQ92738 AC087388.1-201ENST00000571370 1112 ntBASIC22.57■■□□□ 1.2
USP6NLQ92738 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.57■■□□□ 1.2
USP6NLQ92738 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6NLQ92738 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6NLQ92738 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP6NLQ92738 Z98882.1-201ENST00000622160 2253 ntBASIC22.57■■□□□ 1.2
USP6NLQ92738 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.57■■□□□ 1.2
USP6NLQ92738 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6NLQ92738 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6NLQ92738 AL049796.1-201ENST00000565336 1766 ntBASIC22.56■■□□□ 1.2
USP6NLQ92738 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6NLQ92738 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6NLQ92738 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.56■■□□□ 1.2
USP6NLQ92738 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP6NLQ92738 AC004980.1-204ENST00000429707 299 ntBASIC22.56■■□□□ 1.2
USP6NLQ92738 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.56■■□□□ 1.2
USP6NLQ92738 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.56■■□□□ 1.2
USP6NLQ92738 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP6NLQ92738 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.56■■□□□ 1.2
USP6NLQ92738 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
USP6NLQ92738 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP6NLQ92738 LINC00565-201ENST00000562710 2331 ntBASIC22.56■■□□□ 1.2
USP6NLQ92738 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
USP6NLQ92738 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.55■■□□□ 1.2
USP6NLQ92738 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.55■■□□□ 1.2
USP6NLQ92738 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6NLQ92738 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6NLQ92738 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6NLQ92738 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6NLQ92738 INGX-201ENST00000359239 846 ntBASIC22.55■■□□□ 1.2
USP6NLQ92738 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC22.55■■□□□ 1.2
USP6NLQ92738 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.55■■□□□ 1.2
USP6NLQ92738 FAM87A-204ENST00000613235 858 ntBASIC22.55■■□□□ 1.2
USP6NLQ92738 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6NLQ92738 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.55■■□□□ 1.2
USP6NLQ92738 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.55■■□□□ 1.2
USP6NLQ92738 AP006587.1-201ENST00000534129 1502 ntBASIC22.55■■□□□ 1.2
USP6NLQ92738 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP6NLQ92738 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP6NLQ92738 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP6NLQ92738 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.54■■□□□ 1.2
USP6NLQ92738 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP6NLQ92738 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms