Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 AC092474.2-201ENST00000424288 719 ntBASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 AP000867.3-201ENST00000524675 377 ntBASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 RNPS1P1-201ENST00000507437 918 ntBASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 MIR6752-201ENST00000618442 71 ntBASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 REXO1L6P-202ENST00000619970 1078 ntBASIC8.15□□□□□ -1.1
SYNE2Q8WXH0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 AC016734.2-201ENST00000624325 1377 ntBASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.11
SYNE2Q8WXH0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 GAPDHP21-201ENST00000450301 1010 ntBASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 ANKRD20A18P-201ENST00000359341 492 ntBASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 SEC1P-202ENST00000473944 940 ntBASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 KRT16P1-201ENST00000399124 1418 ntBASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 AC112482.1-201ENST00000492080 688 ntBASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYNE2Q8WXH0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 AF238378.1-201ENST00000526806 358 ntBASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms