Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 AC069148.1-201ENST00000608741 768 ntBASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.5□□□□□ -0.25
ALMS1Q8TCU4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 KRT8P45-201ENST00000414328 1447 ntBASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 MIR2861-201ENST00000636310 90 ntBASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 AC011484.1-201ENST00000377652 1995 ntBASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 Z85996.1-201ENST00000494644 937 ntBASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC13.49□□□□□ -0.25
ALMS1Q8TCU4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 YBX1P10-201ENST00000444752 975 ntBASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 C9orf163-202ENST00000624034 2573 ntBASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 AC004951.3-201ENST00000418645 1148 ntBASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ALMS1Q8TCU4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms