Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 HLA-B-256ENST00000639848 1089 ntBASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLL1Q8TB92 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCLL1Q8TB92 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCLL1Q8TB92 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.52■□□□□ 0.71
HMGCLL1Q8TB92 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCLL1Q8TB92 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCLL1Q8TB92 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 AC018445.3-201ENST00000624177 1945 ntBASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 PTBP1P-201ENST00000554374 1601 ntBASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
HMGCLL1Q8TB92 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 AC023632.3-201ENST00000521633 145 ntBASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 AL691432.2-201ENST00000607222 2038 ntBASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLL1Q8TB92 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCLL1Q8TB92 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLL1Q8TB92 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCLL1Q8TB92 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
HMGCLL1Q8TB92 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLL1Q8TB92 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HMGCLL1Q8TB92 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCLL1Q8TB92 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms