Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CNEP1R1Q8N9A8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNEP1R1Q8N9A8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 NBPF21P-201ENST00000425093 1451 ntBASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 SNORA78-201ENST00000459373 127 ntBASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.65■□□□□ 0.42
CNEP1R1Q8N9A8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNEP1R1Q8N9A8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CNEP1R1Q8N9A8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.64■□□□□ 0.42
CNEP1R1Q8N9A8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CNEP1R1Q8N9A8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.64■□□□□ 0.42
CNEP1R1Q8N9A8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 SMG8-203ENST00000578922 2178 ntBASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 KRT16P6-202ENST00000425692 1426 ntBASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 AL135905.2-201ENST00000584934 1404 ntBASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNEP1R1Q8N9A8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms