Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM2Q8N967 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM2Q8N967 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRTM2Q8N967 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.25■□□□□ 0.19
LRTM2Q8N967 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM2Q8N967 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRTM2Q8N967 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.25■□□□□ 0.19
LRTM2Q8N967 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM2Q8N967 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM2Q8N967 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 AC097381.1-201ENST00000429019 1296 ntBASIC16.24■□□□□ 0.19
LRTM2Q8N967 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRTM2Q8N967 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM2Q8N967 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 AP001330.3-201ENST00000520123 633 ntBASIC16.23■□□□□ 0.19
LRTM2Q8N967 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.23■□□□□ 0.19
LRTM2Q8N967 AL356652.1-201ENST00000615962 565 ntBASIC16.23■□□□□ 0.19
LRTM2Q8N967 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.23■□□□□ 0.19
LRTM2Q8N967 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM2Q8N967 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 AC087633.2-202ENST00000565166 1439 ntBASIC16.22■□□□□ 0.19
LRTM2Q8N967 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 IRS3P-201ENST00000223076 1006 ntBASIC16.22■□□□□ 0.19
LRTM2Q8N967 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 SLC7A5P1-201ENST00000568957 537 ntBASIC16.22■□□□□ 0.19
LRTM2Q8N967 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 PTBP1P-201ENST00000554374 1601 ntBASIC16.22■□□□□ 0.19
LRTM2Q8N967 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM2Q8N967 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM2Q8N967 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM2Q8N967 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms