Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.41■□□□□ 0.7
CPSF7Q8N684 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CPSF7Q8N684 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
CPSF7Q8N684 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.4■□□□□ 0.7
CPSF7Q8N684 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.4■□□□□ 0.7
CPSF7Q8N684 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.4■□□□□ 0.7
CPSF7Q8N684 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.4■□□□□ 0.7
CPSF7Q8N684 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.4■□□□□ 0.7
CPSF7Q8N684 AL109923.1-201ENST00000618799 583 ntBASIC19.4■□□□□ 0.7
CPSF7Q8N684 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.4■□□□□ 0.7
CPSF7Q8N684 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.4■□□□□ 0.7
CPSF7Q8N684 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPSF7Q8N684 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CPSF7Q8N684 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CPSF7Q8N684 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
CPSF7Q8N684 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 DUX4L16-201ENST00000555130 1264 ntBASIC19.39■□□□□ 0.69
CPSF7Q8N684 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPSF7Q8N684 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CPSF7Q8N684 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPSF7Q8N684 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPSF7Q8N684 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CPSF7Q8N684 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPSF7Q8N684 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPSF7Q8N684 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.38■□□□□ 0.69
CPSF7Q8N684 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.38■□□□□ 0.69
CPSF7Q8N684 NCF1B-203ENST00000435988 1254 ntBASIC19.38■□□□□ 0.69
CPSF7Q8N684 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPSF7Q8N684 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.38■□□□□ 0.69
CPSF7Q8N684 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.38■□□□□ 0.69
CPSF7Q8N684 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.38■□□□□ 0.69
CPSF7Q8N684 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPSF7Q8N684 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPSF7Q8N684 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPSF7Q8N684 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.38■□□□□ 0.69
CPSF7Q8N684 AC231657.2-201ENST00000624556 255 ntBASIC19.38■□□□□ 0.69
CPSF7Q8N684 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF7Q8N684 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.37■□□□□ 0.69
CPSF7Q8N684 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms