Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.22■■□□□ 1.15
TRIM50Q86XT4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.22■■□□□ 1.15
TRIM50Q86XT4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.22■■□□□ 1.15
TRIM50Q86XT4 AC092720.2-201ENST00000602388 1665 ntBASIC22.22■■□□□ 1.15
TRIM50Q86XT4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TRIM50Q86XT4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.22■■□□□ 1.15
TRIM50Q86XT4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM50Q86XT4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 FAM197Y1-201ENST00000421178 764 ntBASIC22.21■■□□□ 1.15
TRIM50Q86XT4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 SMG8-203ENST00000578922 2178 ntBASIC22.21■■□□□ 1.15
TRIM50Q86XT4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TRIM50Q86XT4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
TRIM50Q86XT4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
TRIM50Q86XT4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.15
TRIM50Q86XT4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 CD177P1-201ENST00000606252 935 ntBASIC22.2■■□□□ 1.14
TRIM50Q86XT4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 AC026471.5-201ENST00000615068 467 ntBASIC22.2■■□□□ 1.14
TRIM50Q86XT4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM50Q86XT4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 AL137060.1-201ENST00000618151 2648 ntBASIC22.19■■□□□ 1.14
TRIM50Q86XT4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM50Q86XT4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 AP003071.4-201ENST00000562276 1284 ntBASIC22.18■■□□□ 1.14
TRIM50Q86XT4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM50Q86XT4 CLDN5-201ENST00000403084 2357 ntBASIC22.18■■□□□ 1.14
TRIM50Q86XT4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms