Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 AC027612.3-201ENST00000413684 1047 ntBASIC20.48■□□□□ 0.87
CCDC25Q86WR0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 AC243732.1-201ENST00000612648 864 ntBASIC20.48■□□□□ 0.87
CCDC25Q86WR0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC25Q86WR0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 KRT18P20-201ENST00000548986 1279 ntBASIC20.47■□□□□ 0.87
CCDC25Q86WR0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC25Q86WR0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC25Q86WR0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC25Q86WR0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms