Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTCHD4Q6ZW05 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 AC019069.1-201ENST00000610008 1333 ntBASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 KRT8P36-201ENST00000489121 1440 ntBASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 TREX1-205ENST00000625293 1783 ntBASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 AC020763.4-201ENST00000623414 4170 ntBASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 AC243732.1-201ENST00000612648 864 ntBASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PTCHD4Q6ZW05 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 SLC7A5P1-201ENST00000568957 537 ntBASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD4Q6ZW05 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.23■□□□□ 0.51
PTCHD4Q6ZW05 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 KRT19P1-201ENST00000405746 1186 ntBASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms