Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 AL591742.1-201ENST00000604433 565 ntBASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 AC004408.2-201ENST00000623613 2777 ntBASIC19.95■□□□□ 0.78
CDHR3Q6ZTQ4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDHR3Q6ZTQ4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 AC069236.1-201ENST00000604339 616 ntBASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 OR10C1-204ENST00000622521 1039 ntBASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 AC008694.1-202ENST00000636953 945 ntBASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDHR3Q6ZTQ4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 AC093787.1-201ENST00000450396 207 ntBASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 AL162412.1-201ENST00000567129 965 ntBASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 AC142086.2-201ENST00000569753 217 ntBASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 AC016405.3-201ENST00000607710 860 ntBASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 FAM21FP-204ENST00000608637 956 ntBASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.92■□□□□ 0.78
CDHR3Q6ZTQ4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 AL138781.1-201ENST00000566567 1274 ntBASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms