Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 EEF1DP3-203ENST00000566025 782 ntBASIC12.6□□□□□ -0.39
LINC00575Q6W349 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC00575Q6W349 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00575Q6W349 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 GOLGA2P11-201ENST00000562660 1621 ntBASIC12.59□□□□□ -0.39
LINC00575Q6W349 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 SERBP1P1-201ENST00000396021 1160 ntBASIC12.59□□□□□ -0.39
LINC00575Q6W349 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 UNC93B8-201ENST00000511903 705 ntBASIC12.59□□□□□ -0.39
LINC00575Q6W349 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00575Q6W349 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
LINC00575Q6W349 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.58□□□□□ -0.39
LINC00575Q6W349 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LINC00575Q6W349 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.58□□□□□ -0.39
LINC00575Q6W349 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 DUX4L19-201ENST00000557448 1267 ntBASIC12.58□□□□□ -0.4
LINC00575Q6W349 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 AC011298.3-201ENST00000615796 283 ntBASIC12.58□□□□□ -0.4
LINC00575Q6W349 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 RARRES2P11-201ENST00000635158 484 ntBASIC12.58□□□□□ -0.4
LINC00575Q6W349 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 AC116050.2-201ENST00000612102 1779 ntBASIC12.58□□□□□ -0.4
LINC00575Q6W349 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00575Q6W349 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC00575Q6W349 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC00575Q6W349 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms